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16 votes

COVID19 - Coronavirus case data (country summary data)

The JHU dashboard you linked has their data available as CSV on Github: https://github.com/CSSEGISandData/COVID-19/tree/master/csse_covid_19_data in particular these CSV files, which contain all ...
philshem's user avatar
  • 17.6k
12 votes
Accepted

Age, Weight and Height dataset

Try the Demographic and Health Survey (DHS). They have what you are looking for, for a large set of countries. On top of that you will in part be able to identify family ties, and you can even ...
sheß's user avatar
  • 1,169
11 votes
Accepted

COVID19 - Coronavirus case data (country summary data)

Index of Countries (community wiki) Global Johns Hopkins University WHO ECDC OurWorldInData Worlddata.AI Europe Belgium Germany and another Germany Switzerland Spain Italy United Kingdom United ...
9 votes

Age, Weight and Height dataset

Okay, this is a very specific dataset for the !Kung San people, but it has height, weight, sex, and age fields. Reference was found in McElreath: "The data contained in data (Howell1) are partial ...
Brandon Loudermilk's user avatar
9 votes

COVID19 - Coronavirus case data (country summary data)

The Italian data from the Civil Protection Agency is updated daily at https://github.com/pcm-dpc/COVID-19 There are a few data sets (CSV) in there. Aggregated data is published at http://...
Bruce Becker's user avatar
9 votes

Dataset on coronavirus government countermeasures (per country/region/city?)

We started a worldwide crowdsourcing data collection on policy measures, including lockdowns at the admin1 level (region) and the country level. Currently we coded data for ~13 countries and are ...
sheß's user avatar
  • 1,169
7 votes

Physician notes with annotated PHI

1) i2b2 2006 Deidentification and Smoking Challenge's data set: NLP Data Set #1B: 889 de-identified discharge summaries with de-identification challenge annotations, training and test sets and ...
Franck Dernoncourt's user avatar
7 votes

Dataset on coronavirus government countermeasures (per country/region/city?)

At this point Wikipedia will have most of the information but not yet machine readable. For a broad data-request on global lockdowns of varying degree, and for an ongoing event, I can't image a ...
philshem's user avatar
  • 17.6k
6 votes

Age, Weight and Height dataset

Here is a set of individual weights and heights for 25,000 children in Hong Kong. There is no age or gender information, though, which does limit its usefulness. From the same site, there is a table ...
nathansnider's user avatar
6 votes
Accepted

World dataset of hospitals

healthsites.io is an open data effort to map healthcare entities (hospitals, clinics, pharmacies, private practices, etc.) worldwide. The data is drawn from OpenStreetMap and at a minimum provides ...
sboysel's user avatar
  • 1,214
6 votes

COVID19 - Coronavirus case data (country summary data)

I successfully parse WHO situation reports and convert them to CSV, from march 1. Older reports are too unstructured. See here: https://github.com/gibello/whocovid19 (reports in data/csv). On the site,...
Pierre-Yves Gibello's user avatar
6 votes

COVID19 - Coronavirus case data (country summary data)

The CDC has US-wide cases, per date https://www.cdc.gov/coronavirus/2019-ncov/cases-updates/testing-in-us.html It's an HTML table, and I haven't found a more machine readable source. But with Python ...
philshem's user avatar
  • 17.6k
6 votes

COVID19 - Coronavirus case data (country summary data)

German data can be found here: https://www.rki.de/DE/Content/InfAZ/N/Neuartiges_Coronavirus/Fallzahlen.html
Parseltongue's user avatar
6 votes

COVID19 - Coronavirus case data (country summary data)

German Covid-19 data from RKI (Robert Koch-Institut) on the state (Bundesländer) and county (Kreise) level can be found here. Data on the county level include patient information such as age group and ...
Peter's user avatar
  • 206
6 votes

Dataset on coronavirus government countermeasures (per country/region/city?)

What about this database? It includes government measures... ACAPS COVID-19: Government Measures Dataset The COVID-19 Government Measures Dataset puts together all the measures implemented by ...
gosz's user avatar
  • 161
6 votes

COVID-19 Clinical Data or Statistics

The Anthem XPRIZE Pandemic Alliance has pledged the availability of such de-identified data including data on previous outbreaks (i.e. swine-flu, influenza, SARS etc.) It is unclear, however, how soon ...
Praxiteles's user avatar
5 votes

How do I find out how much doctors get reimbursed by medicare for certain procedures?

From cms.gov One important factor in these calculations seems to be the RVU, or Relative Value Unit. The real calculation I found is here, near the bottom of the page. Search for [physician fee ...
Bulrush's user avatar
  • 667
5 votes
Accepted

Deaths by falling coconuts

National Electronic Injury Surveillance System (NEISS) is a great resource for free-text details of emergency-room visits, including fatalities. Unfortunately (for you), years 2009-2015 show cutting-...
philshem's user avatar
  • 17.6k
5 votes

Open datasets on medicine/drugs and its uses in treatment

Check out RxClass from the US National Institute of Health's National Library of Medicine: https://mor.nlm.nih.gov/RxClass : Example web UI query for all drugs that may_treat FEVER https://mor.nlm....
Mark Silverberg's user avatar
5 votes

Age, Weight and Height dataset

For the United States, the Behavioral Risk Factor Surveillance System (BRFSS) contains this information on over 400,000 adults every year. According to the website, the BRFSS is a cross-sectional ...
Amos Budde's user avatar
5 votes

COVID19 - Coronavirus case data (country summary data)

Several places for data of Switzerland Covid-19 cases quasi-official: https://github.com/openZH/covid_19 unofficial: https://github.com/daenuprobst/covid19-cases-switzerland Comparison between ...
philshem's user avatar
  • 17.6k
5 votes

COVID19 - Coronavirus case data (country summary data)

Spain data can be found here: https://www.mscbs.gob.es/profesionales/saludPublica/ccayes/alertasActual/nCov-China/situacionActual.htm
Parseltongue's user avatar
5 votes

COVID19 - Coronavirus case data (country summary data)

My take on UK data: https://github.com/sainnr/covid19-uk-data-capture. The goal is to represent daily updates published by UK official bodies in the machine-readable format. Currently, it consists ...
Vladimir Salin's user avatar
5 votes

COVID-19 Clinical Data or Statistics

I've also found a fairly detailed dataset on github https://github.com/beoutbreakprepared/nCoV2019/tree/master/latest_data This is quite exciting as it holds the following data Demography: age,sex ...
Marcus D's user avatar
  • 1,104
4 votes
Accepted

Current biohazard/disease outbreak dataset

CDC CDC Current Outbreak List: http://www.cdc.gov/outbreaks/ Multistate Foodborne Outbreaks - Foodborne outbreaks listed by year http://www.cdc.gov/foodsafety/outbreaks/multistate-outbreaks/outbreaks-...
albert's user avatar
  • 11.9k
4 votes
Accepted

Kidney transplant dataset

It seems that some of the information you are looking for is available but not completely out there in the open. Some leads to track down: Scientific Registry of Transplant Recipients' standard ...
Mark Silverberg's user avatar
4 votes
Accepted

Medical Terminology in Patient Medical Records - Public Data Sets

The MIMIC-III dataset would be well suited to the kind of natural language processing (NLP) study that you are interested in doing. MIMIC-III includes deidentified nursing progress notes, imaging ...
tomp's user avatar
  • 1,446
4 votes

Open Source MRI Image Dataset

Can you find something on OpenfMRi? "The OpenfMRI project was established in 2010 to provide a resource for researchers interested in making their fMRI data openly available to the research ...
knb's user avatar
  • 1,227
4 votes
Accepted

List of database of clinical trials

OpenTrials is building a database of all the data on all clinical trials. As part of that work, we've created a Data Package of Clinical Trials registers here: https://github.com/opentrials/registers ...
Dan Fowler's user avatar
4 votes

E-cigarette accidents

There are 4 incidents from 2015 in NEISS (National Electronic Injury Surveillance System), although using different search terms may give more results. See "Archived Data" links on the right ...
philshem's user avatar
  • 17.6k

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