Questions tagged [medical]

Healthcare, the body, medicine, medical research, pharmacology, anatomy, etc

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25 votes
15 answers
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COVID19 - Coronavirus case data (country summary data)

There are some very good sites showing the state of infections 'now', but I would like to find a data set of COVID-19 infections, deaths and number of tests by day and by country. These are the best I ...
Marcus D's user avatar
  • 1,104
13 votes
4 answers
283 views

COVID-19 Clinical Data or Statistics

Is there anywhere a database that includes case-level information on COVID-19 cases? Such data would typically include patient demographics and/or health information, location, time of onset/testing, ...
dzeltzer's user avatar
  • 314
21 votes
7 answers
30k views

Age, Weight and Height dataset

I am trying to get a dataset (preferable worldwide) that has the attributes (height, weight and age). The only decent dataset that I have been able to find was from here: https://stats.stackexchange....
sachinruk's user avatar
  • 393
18 votes
9 answers
1k views

Dataset on coronavirus government countermeasures (per country/region/city?)

I am looking for a machine readable dataset of what country has enacted what form of lockdown on what date, and possibly the "type" of lockdown (international travel/national and international travel, ...
famargar's user avatar
  • 497
11 votes
4 answers
5k views

What server and technologies can I use to extract data out of Wikipedia's infoboxes (e.g., ATC code for drugs)

Wikipedia is a significant source of data. Data from Wikipedia may be available in various formats via other servers (e.g., SPARQL end point). For a task of extracting all pairs of "ATC code" - "...
userJT's user avatar
  • 720
9 votes
3 answers
4k views

Query medicine descriptions API

I am looking for publicly available API for querying medicine's descriptions. For example, if I supply Carbidopa/Levodopa or Sinemet the expected return data (in json or xml format) is a simple ...
EmilyJ's user avatar
  • 91
8 votes
3 answers
2k views

Where can I get the images data set of skin diseases?

I want to search on images of skin diseases corpus. I need this dataset to index images in my search engine. Please suggest me how and from where i can get those images.
Aman Tandon's user avatar
7 votes
1 answer
667 views

Are there anonymized medical records publicly available for research?

I realize this is kind of a long shot, but I figured I would ask - I'm try to do large scale analysis of medical data for research purposes, but it's exceedingly difficult to get access to medical ...
123's user avatar
  • 181
5 votes
1 answer
2k views

Open large datasets on human body temperature?

Does anyone know of any large population-based dataset that recorded human body temperature?
Myroslava Protsiv's user avatar
4 votes
1 answer
873 views

Physician notes with annotated PHI

I am looking for a data set of physician notes with annotated PHI (protected health information) as defined in Health Insurance Portability and Accountability Act (HIPAA)'s de-identification guide (US ...
Franck Dernoncourt's user avatar
4 votes
3 answers
1k views

DailyMed RESTful API

I am trying to access the INDICATIONS, CONTRAINDICATIONS, ADVERSE REACTIONS, and WARNINGS field using the dailymed API. http://dailymed.nlm.nih.gov/dailymed/services/ However, I cannot seem to find ...
Vinnie's user avatar
  • 143
3 votes
0 answers
140 views

Bacterial infectious diseases dataset

Does anyone know of a dataset relating: bacteria (not viruses or fungi) infectiousness symptoms ...or something of the sort? I'm looking to classify infectiousness (ie. infectious/not infectious) ...
Zach Eisner's user avatar
3 votes
1 answer
192 views

NEISS injury dataset - machine readable and decoded

The National Electronic Injury Surveillance System (NEISS) database offers both a query tool and bulk CSV downloads at maximum one calendar year. The available data dates back to 1991. Patient ...
philshem's user avatar
  • 17.6k
12 votes
4 answers
3k views

Is there a better public version of USA's Social Security Death Master File?

USA data on death can be obtained via Social Security as SSDI (death index) and SSDMF (death master file). http://en.wikipedia.org/wiki/Social_Security_Death_Index One site http://ssdmf.info offers ...
userJT's user avatar
  • 720
12 votes
0 answers
112 views

Validity, Utility and Cost of Clinical Tests

Medical tests are characterized by validity, utility and cost: Validity is the probability that the test results are correct. Utility is the usefulness of having correct results (e.g. how much life ...
Erel Segal-Halevi's user avatar
7 votes
2 answers
2k views

Medical Terminology in Patient Medical Records - Public Data Sets

I am interested in sample data of real patient medical records (anonymized or demographics removed completely) for the purpose of running through NLP system - specifically diagnoses, admissions and ...
DataMania's user avatar
  • 173
7 votes
2 answers
270 views

A database of drugs and their targets

Do you know if there is any free for commercial and non-commercial project database with drugs information and their targets? For example: Drug name: Paracetamol Chemical Formula: C8H9NO2 Target: ...
Tasos's user avatar
  • 4,714
7 votes
1 answer
161 views

Vaccination policies

I am looking for a data set containing vaccination policies by country, and if possible by year. Ideally, the vaccination policy would be stored in some machine-readable format.
Franck Dernoncourt's user avatar
5 votes
4 answers
744 views

I need a list of medications, diagnoses, and medical terms for a police report auto publication project

I have a project with a police department in Washington State that is about to start where I will be automatically publishing police reports not requiring redaction per the state public records act. I ...
Tim Clemans's user avatar
5 votes
4 answers
2k views

List of European Hospitals and Health Clinics

I am looking for a overview on hospitals and medical services provided by the public (and also by the private) healthcare sector in Europe. public hospitals private hospitals and medical clinics ... ...
butch miller's user avatar
5 votes
2 answers
1k views

Where to download a dictionary of medical terms

Can anyone recommend a place to download a dictionary of medical terms in XML or other suitable data format?
user avatar
4 votes
1 answer
35 views

I'm trying to find international obesity prevalence by year

I'm trying to find international obesity prevalence by year. Does anyone have a source at the country level?
Andrew's user avatar
  • 141
4 votes
1 answer
1k views

Dataset of allergies

I'm looking for a dataset containing the following: for each country, for each allergy types, number of humans affected by the allergy. if possible, break down per gender and age.
Franck Dernoncourt's user avatar
4 votes
1 answer
100 views

NEISS injury dataset - machine readable coding for characterizations

The National Electronic Injury Surveillance System (NEISS) database offers Excel downloads (example XLSX, ~50MB) on a year by year basis. The categorization of the injuries in the Excel files is given ...
philshem's user avatar
  • 17.6k
3 votes
1 answer
93 views

WHO's Defined Daily Dose guidelines

On the off chance, anyone know where to get an opensource copy of WHO's Anatomical Therapeutic Chemical (ATC) Defined Daily Dose (DDD) guidelines?
JMcClure's user avatar
  • 293
2 votes
0 answers
95 views

Daily calorie intake and body weight dataset

I'm devising a mathematical method to filter out weight fluctuations from daily weight measurements. To validate the method, I would require a dataset containing daily weight measurements and calorie ...
swineone's user avatar
  • 121
1 vote
1 answer
64 views

COVID-19 - Austria - historical data of new infections per state

I'd like to analyze the development of COVID-19 cases in Austria by state, in respect to the designation of "risk areas" as defined by the Federal Foreign Office of Germany. According to ...
tohuwawohu's user avatar
1 vote
0 answers
866 views

List of French Hospitals and Health Clinics

List of French Hospitals and Health Clinics There might not be a database covering all french hospital. So if we need more data that OpenStreetMap ha - Below is the data for France. The French ...
thePope's user avatar
  • 11
1 vote
1 answer
125 views

Effect of foods on diseases

I am looking for a data set that lists different kind of foods and diseases, and for each pair food-disease indicates whether the food is bad/neutral/good for the disease.
Franck Dernoncourt's user avatar
1 vote
1 answer
123 views

Clinical dataset for machine learning

I want to experiment with Bayesian networks, as well as try other machine learning approaches for learning dependancies in the data. Is there any clinical dataset (containing results of various ...
Lugi's user avatar
  • 111